Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.24■□□□□ 0.99
SLC6A1P30531 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SLC6A1P30531 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC6A1P30531 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A1P30531 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.23■□□□□ 0.99
SLC6A1P30531 AC018358.1-201ENST00000631079 1402 ntBASIC21.23■□□□□ 0.99
SLC6A1P30531 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A1P30531 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC6A1P30531 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A1P30531 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A1P30531 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A1P30531 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A1P30531 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SLC6A1P30531 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC6A1P30531 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A1P30531 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SLC6A1P30531 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A1P30531 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A1P30531 AC012676.1-201ENST00000574705 1949 ntBASIC21.21■□□□□ 0.99
SLC6A1P30531 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A1P30531 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A1P30531 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SLC6A1P30531 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A1P30531 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A1P30531 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A1P30531 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A1P30531 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A1P30531 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A1P30531 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC6A1P30531 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC6A1P30531 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A1P30531 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A1P30531 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC6A1P30531 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A1P30531 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A1P30531 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A1P30531 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A1P30531 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A1P30531 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A1P30531 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC6A1P30531 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A1P30531 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SLC6A1P30531 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A1P30531 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
SLC6A1P30531 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC6A1P30531 MIR3665-201ENST00000578708 105 ntBASIC21.17■□□□□ 0.98
SLC6A1P30531 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A1P30531 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A1P30531 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A1P30531 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SLC6A1P30531 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A1P30531 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC6A1P30531 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A1P30531 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC6A1P30531 AC142381.3-201ENST00000568208 1670 ntBASIC21.15■□□□□ 0.98
SLC6A1P30531 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A1P30531 RPS2P35-201ENST00000443417 897 ntBASIC21.15■□□□□ 0.98
SLC6A1P30531 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A1P30531 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A1P30531 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A1P30531 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A1P30531 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A1P30531 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A1P30531 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC6A1P30531 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A1P30531 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SLC6A1P30531 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A1P30531 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC6A1P30531 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A1P30531 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SLC6A1P30531 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SLC6A1P30531 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A1P30531 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SLC6A1P30531 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A1P30531 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC6A1P30531 AL162393.1-201ENST00000437852 946 ntBASIC21.12■□□□□ 0.97
SLC6A1P30531 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC6A1P30531 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC6A1P30531 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SLC6A1P30531 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A1P30531 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A1P30531 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A1P30531 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SLC6A1P30531 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A1P30531 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A1P30531 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A1P30531 AL139125.2-201ENST00000623134 1869 ntBASIC21.11■□□□□ 0.97
SLC6A1P30531 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC6A1P30531 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC6A1P30531 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A1P30531 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A1P30531 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC6A1P30531 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms