Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
RARAP10276 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
RARAP10276 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.94■■□□□ 1.74
RARAP10276 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.94■■□□□ 1.74
RARAP10276 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RARAP10276 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RARAP10276 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RARAP10276 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RARAP10276 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.93■■□□□ 1.74
RARAP10276 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RARAP10276 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RARAP10276 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RARAP10276 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.91■■□□□ 1.74
RARAP10276 CR559946.2-201ENST00000623684 991 ntBASIC25.91■■□□□ 1.74
RARAP10276 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RARAP10276 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RARAP10276 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RARAP10276 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RARAP10276 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.9■■□□□ 1.74
RARAP10276 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RARAP10276 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.9■■□□□ 1.74
RARAP10276 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RARAP10276 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RARAP10276 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.89■■□□□ 1.74
RARAP10276 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RARAP10276 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.89■■□□□ 1.74
RARAP10276 AC008813.1-201ENST00000536597 885 ntBASIC25.89■■□□□ 1.74
RARAP10276 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RARAP10276 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.89■■□□□ 1.74
RARAP10276 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RARAP10276 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
RARAP10276 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.87■■□□□ 1.73
RARAP10276 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.87■■□□□ 1.73
RARAP10276 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RARAP10276 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
RARAP10276 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
RARAP10276 WHAMMP3-201ENST00000611636 1609 ntBASIC25.86■■□□□ 1.73
RARAP10276 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.86■■□□□ 1.73
RARAP10276 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RARAP10276 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RARAP10276 HLA-V-202ENST00000446817 847 ntBASIC25.85■■□□□ 1.73
RARAP10276 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.85■■□□□ 1.73
RARAP10276 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
RARAP10276 AC145676.1-201ENST00000514988 2004 ntBASIC25.85■■□□□ 1.73
RARAP10276 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
RARAP10276 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.84■■□□□ 1.73
RARAP10276 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RARAP10276 MIR3648-2-201ENST00000581792 180 ntBASIC25.84■■□□□ 1.73
RARAP10276 MIR3648-1-201ENST00000615959 180 ntBASIC25.84■■□□□ 1.73
RARAP10276 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.84■■□□□ 1.73
RARAP10276 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RARAP10276 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RARAP10276 AP004609.3-201ENST00000610705 1884 ntBASIC25.83■■□□□ 1.73
RARAP10276 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RARAP10276 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RARAP10276 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RARAP10276 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
RARAP10276 MIR219A2-201ENST00000608502 1504 ntBASIC25.83■■□□□ 1.72
RARAP10276 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
RARAP10276 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RARAP10276 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RARAP10276 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.82■■□□□ 1.72
RARAP10276 AC148477.6-201ENST00000623746 465 ntBASIC25.82■■□□□ 1.72
RARAP10276 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RARAP10276 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.82■■□□□ 1.72
RARAP10276 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.82■■□□□ 1.72
RARAP10276 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.82■■□□□ 1.72
RARAP10276 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RARAP10276 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.82■■□□□ 1.72
RARAP10276 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RARAP10276 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.81■■□□□ 1.72
RARAP10276 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RARAP10276 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.8■■□□□ 1.72
RARAP10276 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.8■■□□□ 1.72
RARAP10276 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RARAP10276 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RARAP10276 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RARAP10276 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RARAP10276 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RARAP10276 AC016575.1-201ENST00000607026 382 ntBASIC25.78■■□□□ 1.72
RARAP10276 MIR7108-201ENST00000614319 87 ntBASIC25.78■■□□□ 1.72
RARAP10276 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RARAP10276 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RARAP10276 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RARAP10276 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.78■■□□□ 1.72
RARAP10276 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.77■■□□□ 1.72
RARAP10276 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
RARAP10276 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.76■■□□□ 1.71
RARAP10276 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RARAP10276 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RARAP10276 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RARAP10276 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.75■■□□□ 1.71
RARAP10276 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
RARAP10276 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RARAP10276 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms