Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 AC018358.1-201ENST00000631079 1402 ntBASIC20.9■□□□□ 0.94
ZNF728P0DKX0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF728P0DKX0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 AC145676.1-201ENST00000514988 2004 ntBASIC20.85■□□□□ 0.93
ZNF728P0DKX0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF728P0DKX0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF728P0DKX0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MIR3648-2-201ENST00000581792 180 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MIR3648-1-201ENST00000615959 180 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 CR559946.2-201ENST00000623684 991 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF728P0DKX0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF728P0DKX0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC008813.1-201ENST00000536597 885 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC016575.1-201ENST00000607026 382 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC020928.2-201ENST00000588717 2197 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms