Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC1P07992 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC1P07992 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ERCC1P07992 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.75■■□□□ 1.07
ERCC1P07992 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.75■■□□□ 1.07
ERCC1P07992 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ERCC1P07992 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ERCC1P07992 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC1P07992 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.74■■□□□ 1.07
ERCC1P07992 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC1P07992 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.74■■□□□ 1.07
ERCC1P07992 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.73■■□□□ 1.07
ERCC1P07992 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ERCC1P07992 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ERCC1P07992 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC1P07992 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC1P07992 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.72■■□□□ 1.07
ERCC1P07992 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.72■■□□□ 1.07
ERCC1P07992 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC1P07992 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.72■■□□□ 1.07
ERCC1P07992 HSD17B1P1-201ENST00000590052 955 ntBASIC21.72■■□□□ 1.07
ERCC1P07992 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 AC110285.7-201ENST00000624417 1536 ntBASIC21.71■■□□□ 1.07
ERCC1P07992 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC1P07992 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC1P07992 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.7■■□□□ 1.06
ERCC1P07992 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ERCC1P07992 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.7■■□□□ 1.06
ERCC1P07992 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.7■■□□□ 1.06
ERCC1P07992 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC1P07992 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ERCC1P07992 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC1P07992 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
ERCC1P07992 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC1P07992 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC1P07992 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC1P07992 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ERCC1P07992 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ERCC1P07992 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC1P07992 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC1P07992 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC1P07992 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ERCC1P07992 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.67■■□□□ 1.06
ERCC1P07992 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC1P07992 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC1P07992 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC1P07992 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC1P07992 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC1P07992 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC1P07992 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.66■■□□□ 1.06
ERCC1P07992 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC1P07992 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ERCC1P07992 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ERCC1P07992 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC1P07992 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.64■■□□□ 1.06
ERCC1P07992 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.64■■□□□ 1.06
ERCC1P07992 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ERCC1P07992 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.64■■□□□ 1.05
ERCC1P07992 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
ERCC1P07992 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ERCC1P07992 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ERCC1P07992 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.64■■□□□ 1.05
ERCC1P07992 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.63■■□□□ 1.05
ERCC1P07992 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC1P07992 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ERCC1P07992 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC1P07992 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC1P07992 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC1P07992 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC1P07992 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC1P07992 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.62■■□□□ 1.05
ERCC1P07992 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ERCC1P07992 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC1P07992 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC1P07992 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC1P07992 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC1P07992 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.61■■□□□ 1.05
ERCC1P07992 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC1P07992 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC1P07992 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC1P07992 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC1P07992 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC1P07992 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms