Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RETP07949 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RETP07949 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RETP07949 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RETP07949 YBX1P4-201ENST00000392794 808 ntBASIC25.06■■□□□ 1.6
RETP07949 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.06■■□□□ 1.6
RETP07949 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RETP07949 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.05■■□□□ 1.6
RETP07949 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RETP07949 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETP07949 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETP07949 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.04■■□□□ 1.6
RETP07949 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETP07949 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RETP07949 GUSBP5-201ENST00000418136 578 ntBASIC25.03■■□□□ 1.6
RETP07949 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RETP07949 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RETP07949 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
RETP07949 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RETP07949 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RETP07949 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.02■■□□□ 1.6
RETP07949 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
RETP07949 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.01■■□□□ 1.59
RETP07949 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RETP07949 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RETP07949 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RETP07949 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RETP07949 OR2A1-AS1-204ENST00000470435 602 ntBASIC25■■□□□ 1.59
RETP07949 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25■■□□□ 1.59
RETP07949 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25■■□□□ 1.59
RETP07949 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RETP07949 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RETP07949 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.99■■□□□ 1.59
RETP07949 AC139795.1-202ENST00000500444 432 ntBASIC24.99■■□□□ 1.59
RETP07949 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RETP07949 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RETP07949 AL135925.1-201ENST00000605920 1701 ntBASIC24.98■■□□□ 1.59
RETP07949 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RETP07949 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
RETP07949 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETP07949 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RETP07949 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETP07949 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.97■■□□□ 1.59
RETP07949 AC103834.1-201ENST00000520383 144 ntBASIC24.97■■□□□ 1.59
RETP07949 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.97■■□□□ 1.59
RETP07949 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETP07949 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RETP07949 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETP07949 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETP07949 MIR935-201ENST00000401179 91 ntBASIC24.96■■□□□ 1.59
RETP07949 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.96■■□□□ 1.59
RETP07949 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETP07949 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RETP07949 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RETP07949 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.95■■□□□ 1.58
RETP07949 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RETP07949 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.95■■□□□ 1.58
RETP07949 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.95■■□□□ 1.58
RETP07949 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RETP07949 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.95■■□□□ 1.58
RETP07949 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RETP07949 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.95■■□□□ 1.58
RETP07949 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
RETP07949 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.94■■□□□ 1.58
RETP07949 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.94■■□□□ 1.58
RETP07949 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RETP07949 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.93■■□□□ 1.58
RETP07949 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RETP07949 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
RETP07949 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RETP07949 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.93■■□□□ 1.58
RETP07949 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.93■■□□□ 1.58
RETP07949 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RETP07949 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
RETP07949 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.92■■□□□ 1.58
RETP07949 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETP07949 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.92■■□□□ 1.58
RETP07949 AC025884.2-201ENST00000553429 711 ntBASIC24.92■■□□□ 1.58
RETP07949 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
RETP07949 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETP07949 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETP07949 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETP07949 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETP07949 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETP07949 SPCS2P3-201ENST00000500401 656 ntBASIC24.91■■□□□ 1.58
RETP07949 MIR6765-201ENST00000614092 87 ntBASIC24.91■■□□□ 1.58
RETP07949 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETP07949 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETP07949 AC093536.1-201ENST00000569153 554 ntBASIC24.9■■□□□ 1.58
RETP07949 RAP2CP1-202ENST00000605179 643 ntBASIC24.9■■□□□ 1.58
RETP07949 AL359258.2-201ENST00000564063 1566 ntBASIC24.89■■□□□ 1.58
RETP07949 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.89■■□□□ 1.58
RETP07949 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
RETP07949 AL356441.2-201ENST00000443009 864 ntBASIC24.89■■□□□ 1.58
RETP07949 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
RETP07949 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.88■■□□□ 1.57
RETP07949 AC142086.6-201ENST00000621154 1765 ntBASIC24.88■■□□□ 1.57
RETP07949 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETP07949 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETP07949 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms