Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H2ABP04908 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HIST1H2ABP04908 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H2ABP04908 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.39■■□□□ 1.18
HIST1H2ABP04908 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H2ABP04908 AC008813.1-201ENST00000536597 885 ntBASIC22.39■■□□□ 1.17
HIST1H2ABP04908 WHAMMP3-201ENST00000611636 1609 ntBASIC22.39■■□□□ 1.17
HIST1H2ABP04908 AL449106.1-201ENST00000608517 1980 ntBASIC22.38■■□□□ 1.17
HIST1H2ABP04908 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H2ABP04908 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H2ABP04908 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H2ABP04908 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H2ABP04908 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.36■■□□□ 1.17
HIST1H2ABP04908 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2ABP04908 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H2ABP04908 AP004609.3-201ENST00000610705 1884 ntBASIC22.35■■□□□ 1.17
HIST1H2ABP04908 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 ABHD17AP4-201ENST00000411545 909 ntBASIC22.35■■□□□ 1.17
HIST1H2ABP04908 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H2ABP04908 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST1H2ABP04908 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST1H2ABP04908 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2ABP04908 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H2ABP04908 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H2ABP04908 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
HIST1H2ABP04908 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HIST1H2ABP04908 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
HIST1H2ABP04908 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.32■■□□□ 1.16
HIST1H2ABP04908 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2ABP04908 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST1H2ABP04908 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H2ABP04908 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.3■■□□□ 1.16
HIST1H2ABP04908 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HIST1H2ABP04908 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
HIST1H2ABP04908 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HIST1H2ABP04908 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H2ABP04908 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H2ABP04908 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HIST1H2ABP04908 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2ABP04908 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2ABP04908 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2ABP04908 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2ABP04908 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H2ABP04908 AC142472.1-201ENST00000612013 1741 ntBASIC22.26■■□□□ 1.15
HIST1H2ABP04908 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HIST1H2ABP04908 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2ABP04908 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2ABP04908 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.26■■□□□ 1.15
HIST1H2ABP04908 AC148477.6-201ENST00000623746 465 ntBASIC22.26■■□□□ 1.15
HIST1H2ABP04908 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H2ABP04908 MIR219A2-201ENST00000608502 1504 ntBASIC22.26■■□□□ 1.15
HIST1H2ABP04908 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H2ABP04908 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.24■■□□□ 1.15
HIST1H2ABP04908 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H2ABP04908 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.24■■□□□ 1.15
HIST1H2ABP04908 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H2ABP04908 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H2ABP04908 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST1H2ABP04908 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms