Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.75■■□□□ 1.87
HLA-DRAP01903 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.75■■□□□ 1.87
HLA-DRAP01903 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
HLA-DRAP01903 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HLA-DRAP01903 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HLA-DRAP01903 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HLA-DRAP01903 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HLA-DRAP01903 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HLA-DRAP01903 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HLA-DRAP01903 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.74■■□□□ 1.87
HLA-DRAP01903 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
HLA-DRAP01903 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
HLA-DRAP01903 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.73■■□□□ 1.87
HLA-DRAP01903 AL359258.2-201ENST00000564063 1566 ntBASIC26.73■■□□□ 1.87
HLA-DRAP01903 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.73■■□□□ 1.87
HLA-DRAP01903 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
HLA-DRAP01903 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
HLA-DRAP01903 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
HLA-DRAP01903 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
HLA-DRAP01903 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HLA-DRAP01903 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.72■■□□□ 1.87
HLA-DRAP01903 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.72■■□□□ 1.87
HLA-DRAP01903 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.71■■□□□ 1.87
HLA-DRAP01903 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HLA-DRAP01903 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HLA-DRAP01903 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
HLA-DRAP01903 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.7■■□□□ 1.86
HLA-DRAP01903 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HLA-DRAP01903 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
HLA-DRAP01903 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HLA-DRAP01903 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HLA-DRAP01903 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HLA-DRAP01903 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HLA-DRAP01903 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HLA-DRAP01903 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HLA-DRAP01903 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.67■■□□□ 1.86
HLA-DRAP01903 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
HLA-DRAP01903 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
HLA-DRAP01903 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HLA-DRAP01903 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.66■■□□□ 1.86
HLA-DRAP01903 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HLA-DRAP01903 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
HLA-DRAP01903 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
HLA-DRAP01903 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.65■■□□□ 1.86
HLA-DRAP01903 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HLA-DRAP01903 AC126177.7-201ENST00000547904 679 ntBASIC26.65■■□□□ 1.86
HLA-DRAP01903 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
HLA-DRAP01903 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.86
HLA-DRAP01903 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
HLA-DRAP01903 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.64■■□□□ 1.86
HLA-DRAP01903 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.64■■□□□ 1.85
HLA-DRAP01903 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.64■■□□□ 1.85
HLA-DRAP01903 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.63■■□□□ 1.85
HLA-DRAP01903 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HLA-DRAP01903 AC060814.1-201ENST00000554326 538 ntBASIC26.63■■□□□ 1.85
HLA-DRAP01903 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HLA-DRAP01903 AP004609.3-201ENST00000610705 1884 ntBASIC26.63■■□□□ 1.85
HLA-DRAP01903 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HLA-DRAP01903 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HLA-DRAP01903 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HLA-DRAP01903 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HLA-DRAP01903 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.6■■□□□ 1.85
HLA-DRAP01903 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.59■■□□□ 1.85
HLA-DRAP01903 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HLA-DRAP01903 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HLA-DRAP01903 AC142472.1-201ENST00000612013 1741 ntBASIC26.59■■□□□ 1.85
HLA-DRAP01903 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
HLA-DRAP01903 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HLA-DRAP01903 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.58■■□□□ 1.85
HLA-DRAP01903 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.58■■□□□ 1.85
HLA-DRAP01903 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.57■■□□□ 1.84
HLA-DRAP01903 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
HLA-DRAP01903 AC022413.1-201ENST00000624602 984 ntBASIC26.57■■□□□ 1.84
HLA-DRAP01903 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HLA-DRAP01903 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HLA-DRAP01903 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
HLA-DRAP01903 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HLA-DRAP01903 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
HLA-DRAP01903 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.55■■□□□ 1.84
HLA-DRAP01903 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.55■■□□□ 1.84
HLA-DRAP01903 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.55■■□□□ 1.84
HLA-DRAP01903 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
HLA-DRAP01903 AL157400.5-201ENST00000507624 621 ntBASIC26.55■■□□□ 1.84
HLA-DRAP01903 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HLA-DRAP01903 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
HLA-DRAP01903 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HLA-DRAP01903 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
HLA-DRAP01903 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
HLA-DRAP01903 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HLA-DRAP01903 AL359504.2-201ENST00000605506 1601 ntBASIC26.53■■□□□ 1.84
HLA-DRAP01903 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
HLA-DRAP01903 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HLA-DRAP01903 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms