Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HYI-210ENST00000486909 905 ntTSL 5 BASIC38.24■■■■□ 3.71
RAPGEF3O95398 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
RAPGEF3O95398 AL031848.2-201ENST00000607670 837 ntBASIC38.24■■■■□ 3.71
RAPGEF3O95398 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC38.24■■■■□ 3.71
RAPGEF3O95398 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC38.23■■■■□ 3.71
RAPGEF3O95398 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC38.23■■■■□ 3.71
RAPGEF3O95398 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC38.23■■■■□ 3.71
RAPGEF3O95398 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC38.23■■■■□ 3.71
RAPGEF3O95398 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
RAPGEF3O95398 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
RAPGEF3O95398 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
RAPGEF3O95398 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC38.21■■■■□ 3.71
RAPGEF3O95398 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
RAPGEF3O95398 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
RAPGEF3O95398 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC38.18■■■■□ 3.7
RAPGEF3O95398 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC38.18■■■■□ 3.7
RAPGEF3O95398 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC38.17■■■■□ 3.7
RAPGEF3O95398 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC38.17■■■■□ 3.7
RAPGEF3O95398 AC018755.3-202ENST00000596210 929 ntBASIC38.17■■■■□ 3.7
RAPGEF3O95398 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC38.16■■■■□ 3.7
RAPGEF3O95398 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
RAPGEF3O95398 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
RAPGEF3O95398 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
RAPGEF3O95398 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC38.15■■■■□ 3.7
RAPGEF3O95398 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.15■■■■□ 3.7
RAPGEF3O95398 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC38.15■■■■□ 3.7
RAPGEF3O95398 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
RAPGEF3O95398 AC008406.3-201ENST00000620001 1374 ntBASIC38.15■■■■□ 3.7
RAPGEF3O95398 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
RAPGEF3O95398 AC239859.2-201ENST00000444165 318 ntBASIC38.14■■■■□ 3.7
RAPGEF3O95398 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.13■■■■□ 3.69
RAPGEF3O95398 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
RAPGEF3O95398 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC38.12■■■■□ 3.69
RAPGEF3O95398 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.12■■■■□ 3.69
RAPGEF3O95398 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC38.12■■■■□ 3.69
RAPGEF3O95398 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
RAPGEF3O95398 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
RAPGEF3O95398 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
RAPGEF3O95398 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
RAPGEF3O95398 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.09■■■■□ 3.69
RAPGEF3O95398 RNF146-205ENST00000477776 762 ntTSL 3 BASIC38.09■■■■□ 3.69
RAPGEF3O95398 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC38.09■■■■□ 3.69
RAPGEF3O95398 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC38.09■■■■□ 3.69
RAPGEF3O95398 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
RAPGEF3O95398 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
RAPGEF3O95398 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
RAPGEF3O95398 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
RAPGEF3O95398 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC38.08■■■■□ 3.69
RAPGEF3O95398 MIR3960-201ENST00000583311 91 ntBASIC38.08■■■■□ 3.69
RAPGEF3O95398 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC38.07■■■■□ 3.68
RAPGEF3O95398 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
RAPGEF3O95398 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.06■■■■□ 3.68
RAPGEF3O95398 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC38.05■■■■□ 3.68
RAPGEF3O95398 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
RAPGEF3O95398 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC38.04■■■■□ 3.68
RAPGEF3O95398 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC38.04■■■■□ 3.68
RAPGEF3O95398 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC38.04■■■■□ 3.68
RAPGEF3O95398 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
RAPGEF3O95398 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
RAPGEF3O95398 CREM-229ENST00000474362 1030 ntTSL 2 BASIC38.03■■■■□ 3.68
RAPGEF3O95398 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
RAPGEF3O95398 PEMT-206ENST00000435340 960 ntTSL 5 BASIC38.02■■■■□ 3.68
RAPGEF3O95398 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
RAPGEF3O95398 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC38.01■■■■□ 3.68
RAPGEF3O95398 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC38.01■■■■□ 3.68
RAPGEF3O95398 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38■■■■□ 3.67
RAPGEF3O95398 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
RAPGEF3O95398 MTX2-204ENST00000443241 799 ntTSL 3 BASIC37.99■■■■□ 3.67
RAPGEF3O95398 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.99■■■■□ 3.67
RAPGEF3O95398 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.98■■■■□ 3.67
RAPGEF3O95398 MIR638-201ENST00000385237 100 ntBASIC37.98■■■■□ 3.67
RAPGEF3O95398 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC37.96■■■■□ 3.67
RAPGEF3O95398 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC37.96■■■■□ 3.67
RAPGEF3O95398 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC37.96■■■■□ 3.67
RAPGEF3O95398 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
RAPGEF3O95398 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
RAPGEF3O95398 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC37.93■■■■□ 3.66
RAPGEF3O95398 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
RAPGEF3O95398 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.93■■■■□ 3.66
RAPGEF3O95398 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
RAPGEF3O95398 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC37.92■■■■□ 3.66
RAPGEF3O95398 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC37.92■■■■□ 3.66
RAPGEF3O95398 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
RAPGEF3O95398 AC100797.4-201ENST00000631653 1827 ntBASIC37.91■■■■□ 3.66
RAPGEF3O95398 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
RAPGEF3O95398 Z92544.1-202ENST00000571933 1220 ntBASIC37.91■■■■□ 3.66
RAPGEF3O95398 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC37.9■■■■□ 3.66
RAPGEF3O95398 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
RAPGEF3O95398 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC37.89■■■■□ 3.66
RAPGEF3O95398 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.89■■■■□ 3.66
RAPGEF3O95398 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC37.88■■■■□ 3.65
RAPGEF3O95398 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC37.87■■■■□ 3.65
RAPGEF3O95398 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
RAPGEF3O95398 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC37.87■■■■□ 3.65
RAPGEF3O95398 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
RAPGEF3O95398 TK2-216ENST00000564917 1156 ntTSL 3 BASIC37.86■■■■□ 3.65
RAPGEF3O95398 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC37.86■■■■□ 3.65
RAPGEF3O95398 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC37.86■■■■□ 3.65
RAPGEF3O95398 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
RAPGEF3O95398 AC019171.1-201ENST00000601251 1056 ntBASIC37.85■■■■□ 3.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms