Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SNCGO76070 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC16.73■□□□□ 0.27
SNCGO76070 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCGO76070 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.73■□□□□ 0.27
SNCGO76070 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNCGO76070 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.73■□□□□ 0.27
SNCGO76070 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SNCGO76070 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNCGO76070 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCGO76070 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SNCGO76070 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNCGO76070 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCGO76070 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCGO76070 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNCGO76070 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNCGO76070 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNCGO76070 MVK-208ENST00000539696 608 ntTSL 5 BASIC16.7■□□□□ 0.26
SNCGO76070 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SNCGO76070 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNCGO76070 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNCGO76070 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNCGO76070 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC16.69■□□□□ 0.26
SNCGO76070 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.69■□□□□ 0.26
SNCGO76070 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNCGO76070 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SNCGO76070 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SNCGO76070 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNCGO76070 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNCGO76070 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNCGO76070 AL135925.1-201ENST00000605920 1701 ntBASIC16.68■□□□□ 0.26
SNCGO76070 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.68■□□□□ 0.26
SNCGO76070 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNCGO76070 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCGO76070 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCGO76070 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNCGO76070 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCGO76070 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SNCGO76070 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCGO76070 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCGO76070 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCGO76070 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNCGO76070 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCGO76070 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNCGO76070 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNCGO76070 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNCGO76070 AC015813.7-201ENST00000623294 581 ntBASIC16.65■□□□□ 0.26
SNCGO76070 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCGO76070 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCGO76070 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCGO76070 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCGO76070 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNCGO76070 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCGO76070 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCGO76070 AC133561.1-201ENST00000568600 2415 ntBASIC16.64■□□□□ 0.25
SNCGO76070 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.64■□□□□ 0.25
SNCGO76070 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCGO76070 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCGO76070 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNCGO76070 CLDN5-201ENST00000403084 2357 ntBASIC16.63■□□□□ 0.25
SNCGO76070 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNCGO76070 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCGO76070 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNCGO76070 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCGO76070 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SNCGO76070 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCGO76070 DRD5P2-201ENST00000421395 2012 ntBASIC16.62■□□□□ 0.25
SNCGO76070 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCGO76070 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNCGO76070 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
SNCGO76070 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCGO76070 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCGO76070 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.61■□□□□ 0.25
SNCGO76070 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCGO76070 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCGO76070 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.61■□□□□ 0.25
SNCGO76070 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCGO76070 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCGO76070 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCGO76070 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SNCGO76070 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCGO76070 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCGO76070 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms