Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NPHS1O60500 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NPHS1O60500 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPHS1O60500 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.11■■□□□ 1.45
NPHS1O60500 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPHS1O60500 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPHS1O60500 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPHS1O60500 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NPHS1O60500 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NPHS1O60500 AC044849.2-201ENST00000606596 710 ntBASIC24.1■■□□□ 1.45
NPHS1O60500 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NPHS1O60500 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.1■■□□□ 1.45
NPHS1O60500 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NPHS1O60500 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.1■■□□□ 1.45
NPHS1O60500 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.09■■□□□ 1.45
NPHS1O60500 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NPHS1O60500 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NPHS1O60500 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NPHS1O60500 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
NPHS1O60500 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
NPHS1O60500 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.08■■□□□ 1.44
NPHS1O60500 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.07■■□□□ 1.44
NPHS1O60500 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
NPHS1O60500 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 AL162393.1-201ENST00000437852 946 ntBASIC24.07■■□□□ 1.44
NPHS1O60500 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NPHS1O60500 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.06■■□□□ 1.44
NPHS1O60500 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPHS1O60500 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
NPHS1O60500 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.06■■□□□ 1.44
NPHS1O60500 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NPHS1O60500 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPHS1O60500 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.05■■□□□ 1.44
NPHS1O60500 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NPHS1O60500 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPHS1O60500 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.04■■□□□ 1.44
NPHS1O60500 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.04■■□□□ 1.44
NPHS1O60500 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.04■■□□□ 1.44
NPHS1O60500 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
NPHS1O60500 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPHS1O60500 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NPHS1O60500 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.03■■□□□ 1.44
NPHS1O60500 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.03■■□□□ 1.44
NPHS1O60500 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.03■■□□□ 1.44
NPHS1O60500 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NPHS1O60500 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
NPHS1O60500 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NPHS1O60500 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPHS1O60500 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPHS1O60500 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPHS1O60500 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.02■■□□□ 1.44
NPHS1O60500 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NPHS1O60500 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPHS1O60500 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NPHS1O60500 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
NPHS1O60500 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.01■■□□□ 1.43
NPHS1O60500 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.01■■□□□ 1.43
NPHS1O60500 AC021231.2-201ENST00000594613 730 ntBASIC24.01■■□□□ 1.43
NPHS1O60500 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NPHS1O60500 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NPHS1O60500 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
NPHS1O60500 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NPHS1O60500 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24■■□□□ 1.43
NPHS1O60500 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NPHS1O60500 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NPHS1O60500 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NPHS1O60500 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NPHS1O60500 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NPHS1O60500 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NPHS1O60500 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NPHS1O60500 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
NPHS1O60500 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
NPHS1O60500 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
NPHS1O60500 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPHS1O60500 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPHS1O60500 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPHS1O60500 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NPHS1O60500 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.96■■□□□ 1.43
NPHS1O60500 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NPHS1O60500 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
NPHS1O60500 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.95■■□□□ 1.42
NPHS1O60500 AC010501.1-201ENST00000606270 1962 ntBASIC23.95■■□□□ 1.42
NPHS1O60500 DUX4L29-201ENST00000425409 679 ntBASIC23.95■■□□□ 1.42
NPHS1O60500 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NPHS1O60500 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
NPHS1O60500 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.94■■□□□ 1.42
NPHS1O60500 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
NPHS1O60500 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms