Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.29■■□□□ 1.48
CDC7O00311 HLA-V-202ENST00000446817 847 ntBASIC24.29■■□□□ 1.48
CDC7O00311 CR559946.2-201ENST00000623684 991 ntBASIC24.29■■□□□ 1.48
CDC7O00311 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC7O00311 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CDC7O00311 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC7O00311 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.29■■□□□ 1.48
CDC7O00311 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC7O00311 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC7O00311 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC7O00311 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.28■■□□□ 1.48
CDC7O00311 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC7O00311 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC7O00311 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.28■■□□□ 1.48
CDC7O00311 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC7O00311 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CDC7O00311 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC7O00311 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.28■■□□□ 1.48
CDC7O00311 MIR219A2-201ENST00000608502 1504 ntBASIC24.27■■□□□ 1.48
CDC7O00311 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDC7O00311 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.27■■□□□ 1.48
CDC7O00311 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDC7O00311 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CDC7O00311 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC7O00311 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC7O00311 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.26■■□□□ 1.47
CDC7O00311 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.26■■□□□ 1.47
CDC7O00311 AC091060.1-201ENST00000623524 1766 ntBASIC24.26■■□□□ 1.47
CDC7O00311 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CDC7O00311 AC142472.1-201ENST00000612013 1741 ntBASIC24.25■■□□□ 1.47
CDC7O00311 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.25■■□□□ 1.47
CDC7O00311 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.25■■□□□ 1.47
CDC7O00311 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC7O00311 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC7O00311 AC148477.6-201ENST00000623746 465 ntBASIC24.24■■□□□ 1.47
CDC7O00311 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CDC7O00311 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC7O00311 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC7O00311 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC7O00311 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC7O00311 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC7O00311 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC7O00311 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
CDC7O00311 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC7O00311 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC7O00311 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC7O00311 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC7O00311 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.22■■□□□ 1.47
CDC7O00311 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CDC7O00311 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.21■■□□□ 1.47
CDC7O00311 MIR3648-2-201ENST00000581792 180 ntBASIC24.21■■□□□ 1.47
CDC7O00311 MIR3648-1-201ENST00000615959 180 ntBASIC24.21■■□□□ 1.47
CDC7O00311 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.21■■□□□ 1.47
CDC7O00311 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC7O00311 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDC7O00311 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDC7O00311 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDC7O00311 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CDC7O00311 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CDC7O00311 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CDC7O00311 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.19■■□□□ 1.46
CDC7O00311 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC7O00311 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.18■■□□□ 1.46
CDC7O00311 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDC7O00311 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CDC7O00311 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
CDC7O00311 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC7O00311 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC7O00311 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
CDC7O00311 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
CDC7O00311 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDC7O00311 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.17■■□□□ 1.46
CDC7O00311 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.16■■□□□ 1.46
CDC7O00311 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC7O00311 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.16■■□□□ 1.46
CDC7O00311 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDC7O00311 AC016575.1-201ENST00000607026 382 ntBASIC24.16■■□□□ 1.46
CDC7O00311 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDC7O00311 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.16■■□□□ 1.46
CDC7O00311 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC7O00311 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.15■■□□□ 1.46
CDC7O00311 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC7O00311 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.15■■□□□ 1.46
CDC7O00311 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDC7O00311 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CDC7O00311 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC7O00311 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.14■■□□□ 1.45
CDC7O00311 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC7O00311 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
CDC7O00311 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC7O00311 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC7O00311 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDC7O00311 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC7O00311 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.12■■□□□ 1.45
CDC7O00311 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC7O00311 MIR7108-201ENST00000614319 87 ntBASIC24.12■■□□□ 1.45
CDC7O00311 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC7O00311 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC7O00311 AC092803.2-201ENST00000564287 1899 ntBASIC24.11■■□□□ 1.45
CDC7O00311 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms