Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 AC142381.3-201ENST00000568208 1670 ntBASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV6-1A0A0K0K1D8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV6-1A0A0K0K1D8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-1A0A0K0K1D8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV6-1A0A0K0K1D8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV6-1A0A0K0K1D8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-1A0A0K0K1D8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.52■□□□□ 0.55
TRBV6-1A0A0K0K1D8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 AC010501.1-201ENST00000606270 1962 ntBASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-1A0A0K0K1D8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 AC136428.2-201ENST00000563187 214 ntBASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-1A0A0K0K1D8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 WHAMMP3-201ENST00000611636 1609 ntBASIC18.49■□□□□ 0.55
TRBV6-1A0A0K0K1D8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-1A0A0K0K1D8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-1A0A0K0K1D8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-1A0A0K0K1D8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-1A0A0K0K1D8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-1A0A0K0K1D8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-1A0A0K0K1D8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-1A0A0K0K1D8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRBV6-1A0A0K0K1D8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.46■□□□□ 0.55
TRBV6-1A0A0K0K1D8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV6-1A0A0K0K1D8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-1A0A0K0K1D8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV6-1A0A0K0K1D8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV6-1A0A0K0K1D8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-1A0A0K0K1D8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 AC097358.2-201ENST00000607541 1159 ntBASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 AC005559.1-201ENST00000589661 871 ntBASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 MIR6090-201ENST00000622481 60 ntBASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV6-1A0A0K0K1D8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRBV6-1A0A0K0K1D8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV6-1A0A0K0K1D8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-1A0A0K0K1D8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-1A0A0K0K1D8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms