Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAV12-1A0A0B4J245 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV12-1A0A0B4J245 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV12-1A0A0B4J245 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV12-1A0A0B4J245 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV12-1A0A0B4J245 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV12-1A0A0B4J245 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV12-1A0A0B4J245 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV12-1A0A0B4J245 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV12-1A0A0B4J245 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV12-1A0A0B4J245 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV12-1A0A0B4J245 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 AC133561.1-201ENST00000568600 2415 ntBASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 AL139125.2-201ENST00000623134 1869 ntBASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV12-1A0A0B4J245 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV12-1A0A0B4J245 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV12-1A0A0B4J245 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV12-1A0A0B4J245 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV12-1A0A0B4J245 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV12-1A0A0B4J245 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 LINC00543-201ENST00000567234 1845 ntBASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 AL133380.1-201ENST00000506013 324 ntBASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV12-1A0A0B4J245 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV12-1A0A0B4J245 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-1A0A0B4J245 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV12-1A0A0B4J245 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-1A0A0B4J245 ZNRF2P1-201ENST00000441407 443 ntBASIC17.24■□□□□ 0.35
TRAV12-1A0A0B4J245 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV12-1A0A0B4J245 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV12-1A0A0B4J245 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV12-1A0A0B4J245 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV12-1A0A0B4J245 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-1A0A0B4J245 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms