Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.55■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 GPX1-201ENST00000419349 1106 ntBASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 AL449106.1-201ENST00000608517 1980 ntBASIC22.51■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 AL121749.1-202ENST00000609313 2153 ntBASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 AC126177.7-201ENST00000547904 679 ntBASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 AL359258.2-201ENST00000564063 1566 ntBASIC22.46■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P2-201ENST00000394842 485 ntBASIC22.46■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.46■■□□□ 1.19
TNFSF12-TNFSF13A0A0A6YY99 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.45■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 AC022413.1-201ENST00000624602 984 ntBASIC22.45■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.45■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 RNF126P1-201ENST00000567452 1320 ntBASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.43■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.42■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.41■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.41■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
TNFSF12-TNFSF13A0A0A6YY99 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 AP004609.3-201ENST00000610705 1884 ntBASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.38■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 AC060814.1-201ENST00000554326 538 ntBASIC22.37■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms