Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TRBV20-1A0A075B6N2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRBV20-1A0A075B6N2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV20-1A0A075B6N2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV20-1A0A075B6N2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRBV20-1A0A075B6N2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV20-1A0A075B6N2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
TRBV20-1A0A075B6N2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV20-1A0A075B6N2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV20-1A0A075B6N2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV20-1A0A075B6N2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRBV20-1A0A075B6N2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV20-1A0A075B6N2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV20-1A0A075B6N2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV20-1A0A075B6N2 AC092803.2-201ENST00000564287 1899 ntBASIC16.54■□□□□ 0.24
TRBV20-1A0A075B6N2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV20-1A0A075B6N2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV20-1A0A075B6N2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV20-1A0A075B6N2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRBV20-1A0A075B6N2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV20-1A0A075B6N2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
TRBV20-1A0A075B6N2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRBV20-1A0A075B6N2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 PKD1P6-201ENST00000343738 4769 ntBASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV20-1A0A075B6N2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV20-1A0A075B6N2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV20-1A0A075B6N2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV20-1A0A075B6N2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV20-1A0A075B6N2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV20-1A0A075B6N2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV20-1A0A075B6N2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV20-1A0A075B6N2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV20-1A0A075B6N2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV20-1A0A075B6N2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV20-1A0A075B6N2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBV20-1A0A075B6N2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV20-1A0A075B6N2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV20-1A0A075B6N2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV20-1A0A075B6N2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV20-1A0A075B6N2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 AC142381.3-201ENST00000568208 1670 ntBASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRBV20-1A0A075B6N2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.46■□□□□ 0.22
TRBV20-1A0A075B6N2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV20-1A0A075B6N2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms