Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DDX49Q9Y6V7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
DDX49Q9Y6V7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DDX49Q9Y6V7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DDX49Q9Y6V7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
DDX49Q9Y6V7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 AC009053.2-201ENST00000563701 2365 ntBASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
DDX49Q9Y6V7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 OR6D1P-202ENST00000641007 5290 ntBASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 UPK3BP1-201ENST00000428678 509 ntBASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
DDX49Q9Y6V7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 AL499627.1-201ENST00000569373 2188 ntBASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX49Q9Y6V7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms