Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 HYMAI.1-201ENST00000620949 238 ntBASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 AC079602.3-201ENST00000623931 403 ntBASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 AL121956.5-201ENST00000625261 221 ntBASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 WIZP1-201ENST00000531444 2299 ntBASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLCA3PQ9Y6N3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCA3PQ9Y6N3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 AC135050.7-201ENST00000624508 2218 ntBASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 AC106820.2-201ENST00000563775 3264 ntBASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLCA3PQ9Y6N3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 HLA-F-220ENST00000434407 884 ntBASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 VENTXP5-201ENST00000523979 775 ntBASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 AC083849.1-201ENST00000615227 514 ntBASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 SDHAP2-201ENST00000455183 2001 ntBASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCA3PQ9Y6N3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 AC073592.3-201ENST00000625118 1834 ntBASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 AC008687.5-201ENST00000593746 558 ntBASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCA3PQ9Y6N3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms