Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 PRYP5-201ENST00000451909 266 ntBASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ARFGEF1Q9Y6D6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ARFGEF1Q9Y6D6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 Z92544.3-201ENST00000624747 417 ntBASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC006504.4-201ENST00000592118 1568 ntBASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 AC008667.4-201ENST00000607370 168 ntBASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.99■■□□□ 1.11
ARFGEF1Q9Y6D6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 IGLL3P-201ENST00000412472 434 ntBASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 AL035252.4-201ENST00000624174 288 ntBASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 AC010460.3-201ENST00000511359 1579 ntBASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ARFGEF1Q9Y6D6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 KLF4P1-201ENST00000412782 1185 ntBASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms