Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC148477.5-201ENST00000625164 1645 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC108751.1-201ENST00000490852 363 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC136632.2-201ENST00000512891 861 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC126763.1-201ENST00000552015 2118 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 AL031598.1-201ENST00000561511 1773 ntBASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 PMS2P2-201ENST00000425039 1128 ntBASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 DNAJB3-201ENST00000446806 729 ntBASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 AL691403.2-201ENST00000618460 490 ntBASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN10AQ9Y5Y9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 AC004817.3-201ENST00000602957 2129 ntBASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 PRYP5-201ENST00000451909 266 ntBASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN10AQ9Y5Y9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 ELK2BP-201ENST00000415014 1224 ntBASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN10AQ9Y5Y9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 AC023274.1-201ENST00000418278 595 ntBASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN10AQ9Y5Y9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms