Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDC42BPBQ9Y5S2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 AC092865.6-201ENST00000642101 219 ntBASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 HTR5BP-201ENST00000430851 1154 ntBASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 PRYP5-201ENST00000451909 266 ntBASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 GMCL1P1-201ENST00000463439 1581 ntBASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 AC006504.4-201ENST00000592118 1568 ntBASIC27.21■■□□□ 1.95
CDC42BPBQ9Y5S2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPBQ9Y5S2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPBQ9Y5S2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPBQ9Y5S2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.2■■□□□ 1.95
CDC42BPBQ9Y5S2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPBQ9Y5S2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPBQ9Y5S2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 AC254562.1-201ENST00000417586 456 ntBASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 RFPL4AP1-201ENST00000530883 850 ntBASIC27.19■■□□□ 1.94
CDC42BPBQ9Y5S2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 HCG4B-203ENST00000450128 991 ntBASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 AL513190.1-201ENST00000621254 727 ntBASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CDC42BPBQ9Y5S2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 LINC02084-201ENST00000606069 1096 ntBASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.17■■□□□ 1.94
CDC42BPBQ9Y5S2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms