Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 CYP2D8P-201ENST00000433633 1490 ntBASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA3Q9Y5H8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 PRORSD1P-202ENST00000563365 2154 ntBASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AC128688.1-201ENST00000487626 519 ntBASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AC024243.1-201ENST00000609234 778 ntBASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA3Q9Y5H8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 AC009947.2-201ENST00000444014 672 ntBASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 AC010947.1-201ENST00000623454 693 ntBASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 KRT8P9-201ENST00000558927 1449 ntBASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA3Q9Y5H8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA3Q9Y5H8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms