Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA11Q9Y5H2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 FLJ13224-201ENST00000313737 1514 ntBASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.58■□□□□ 0.41
PCDHGA11Q9Y5H2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 LINC00896-202ENST00000609602 2128 ntBASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 AC141257.4-201ENST00000634557 245 ntBASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 AC136944.6-201ENST00000634818 245 ntBASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA11Q9Y5H2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 LIN28AP1-201ENST00000429574 405 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MIR3917-201ENST00000580971 93 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 AL138966.2-201ENST00000621997 464 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 AC073912.3-201ENST00000624414 853 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 PRORSD1P-202ENST00000563365 2154 ntBASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA11Q9Y5H2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms