Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AP002383.4-201ENST00000442518 975 ntBASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AL121672.3-201ENST00000608644 468 ntBASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB1Q9Y5F3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB1Q9Y5F3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 KRT8P10-201ENST00000450021 1447 ntBASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 AP002414.4-201ENST00000589764 1148 ntBASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 AC008687.5-201ENST00000593746 558 ntBASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB1Q9Y5F3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms