Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 UNC93B6-202ENST00000528242 690 ntBASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.74■□□□□ 0.59
MTCL1Q9Y4B5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 AC148477.5-201ENST00000625164 1645 ntBASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTCL1Q9Y4B5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 KRT18P3-201ENST00000451602 1288 ntBASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
MTCL1Q9Y4B5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 AC002310.6-201ENST00000624451 1377 ntBASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
MTCL1Q9Y4B5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 MIR940-201ENST00000401276 94 ntBASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 AC103564.2-201ENST00000432853 1299 ntBASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTCL1Q9Y4B5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms