Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 WWOX-216ENST00000569818 525 ntBASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 AC010653.2-201ENST00000623505 997 ntBASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 AC112497.1-201ENST00000624824 639 ntBASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 ESPNP-201ENST00000270691 2015 ntBASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR1DQ9Y2S0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 REXO1L9P-201ENST00000604264 2108 ntBASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 AL163051.1-201ENST00000569214 1512 ntBASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 MMP23A-201ENST00000234610 1017 ntBASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 TSPY14P-201ENST00000303979 915 ntBASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 MIR149-201ENST00000384879 89 ntBASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR1DQ9Y2S0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.21■□□□□ 0.18
POLR1DQ9Y2S0 AC093677.2-201ENST00000600169 1863 ntBASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR1DQ9Y2S0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR1DQ9Y2S0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms