Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AL512604.3-201ENST00000569583 964 ntBASIC17.09■□□□□ 0.33
RNF6Q9Y252 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF6Q9Y252 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF6Q9Y252 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF6Q9Y252 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF6Q9Y252 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF6Q9Y252 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
RNF6Q9Y252 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 TSPY23P-201ENST00000440136 739 ntBASIC17.08■□□□□ 0.32
RNF6Q9Y252 CA15P1-201ENST00000481698 905 ntBASIC17.08■□□□□ 0.32
RNF6Q9Y252 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF6Q9Y252 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF6Q9Y252 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 MTMR9LP-203ENST00000426597 1545 ntBASIC17.07■□□□□ 0.32
RNF6Q9Y252 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF6Q9Y252 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.07■□□□□ 0.32
RNF6Q9Y252 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF6Q9Y252 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 OR6D1P-202ENST00000641007 5290 ntBASIC17.06■□□□□ 0.32
RNF6Q9Y252 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 SLC25A6P5-201ENST00000435663 894 ntBASIC17.06■□□□□ 0.32
RNF6Q9Y252 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 AL031432.5-201ENST00000641059 760 ntBASIC17.06■□□□□ 0.32
RNF6Q9Y252 SIRPAP1-201ENST00000448467 1770 ntBASIC17.06■□□□□ 0.32
RNF6Q9Y252 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms