Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNNQ9UQP3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNNQ9UQP3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNNQ9UQP3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNNQ9UQP3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 MIR662-201ENST00000384847 95 ntBASIC23.02■■□□□ 1.28
TNNQ9UQP3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNNQ9UQP3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC23.02■■□□□ 1.28
TNNQ9UQP3 AC006116.8-202ENST00000587620 1550 ntBASIC23.01■■□□□ 1.27
TNNQ9UQP3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 HOMER2P1-201ENST00000455653 964 ntBASIC23.01■■□□□ 1.27
TNNQ9UQP3 AC092647.4-201ENST00000457211 535 ntBASIC23.01■■□□□ 1.27
TNNQ9UQP3 NTF6B-201ENST00000591913 560 ntBASIC23.01■■□□□ 1.27
TNNQ9UQP3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.01■■□□□ 1.27
TNNQ9UQP3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNNQ9UQP3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23■■□□□ 1.27
TNNQ9UQP3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
TNNQ9UQP3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23■■□□□ 1.27
TNNQ9UQP3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23■■□□□ 1.27
TNNQ9UQP3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23■■□□□ 1.27
TNNQ9UQP3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TNNQ9UQP3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TNNQ9UQP3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TNNQ9UQP3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23■■□□□ 1.27
TNNQ9UQP3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TNNQ9UQP3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TNNQ9UQP3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.99■■□□□ 1.27
TNNQ9UQP3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 AL671277.2-201ENST00000458060 996 ntBASIC22.99■■□□□ 1.27
TNNQ9UQP3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.99■■□□□ 1.27
TNNQ9UQP3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.99■■□□□ 1.27
TNNQ9UQP3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNNQ9UQP3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms