Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC079776.2-201ENST00000641154 1609 ntBASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC040169.1-201ENST00000565382 521 ntBASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AL691403.2-201ENST00000618460 490 ntBASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CDK11AQ9UQ88 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
CDK11AQ9UQ88 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 CENPM-204ENST00000402420 688 ntTSL 5 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 AC096633.1-201ENST00000422446 749 ntBASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 AC073592.4-201ENST00000623827 446 ntBASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 AP002414.3-201ENST00000589352 1468 ntBASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC27.88■■■□□ 2.05
CDK11AQ9UQ88 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 GMCL1P1-201ENST00000463439 1581 ntBASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 RPSAP43-201ENST00000402237 625 ntBASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 AC055717.3-201ENST00000622967 595 ntBASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 AL022326.1-202ENST00000641533 845 ntBASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CDK11AQ9UQ88 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 PMPCAP1-201ENST00000508114 1576 ntBASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 GPX1P2-201ENST00000429271 606 ntBASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 AC122714.2-201ENST00000502787 707 ntBASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC27.86■■■□□ 2.05
CDK11AQ9UQ88 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 AC132938.6-201ENST00000623828 1655 ntBASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 DNAJB3-201ENST00000446806 729 ntBASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
CDK11AQ9UQ88 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 YBX2P1-201ENST00000394192 760 ntBASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 RNA5SP416-201ENST00000516838 111 ntBASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CDK11AQ9UQ88 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms