Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CALYQ9NYX4 AC211429.1-201ENST00000415277 523 ntBASIC15.02■□□□□ -0
CALYQ9NYX4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.02■□□□□ -0
CALYQ9NYX4 BX664615.1-201ENST00000443558 458 ntBASIC15.02■□□□□ -0
CALYQ9NYX4 LINC01023-201ENST00000606054 436 ntBASIC15.02■□□□□ -0
CALYQ9NYX4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.02□□□□□ -0.01
CALYQ9NYX4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.02□□□□□ -0.01
CALYQ9NYX4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.02□□□□□ -0.01
CALYQ9NYX4 AC008764.6-201ENST00000595909 2069 ntBASIC15.02□□□□□ -0.01
CALYQ9NYX4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CALYQ9NYX4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.02□□□□□ -0.01
CALYQ9NYX4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AC005521.1-201ENST00000393351 872 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 RASA4DP-201ENST00000460726 1199 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AL441883.1-201ENST00000566170 1045 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 AC139887.4-201ENST00000607877 719 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PKD1P1-201ENST00000458669 6805 ntBASIC15.01□□□□□ -0.01
CALYQ9NYX4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.01□□□□□ -0.01
CALYQ9NYX4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CALYQ9NYX4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15□□□□□ -0.01
CALYQ9NYX4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15□□□□□ -0.01
CALYQ9NYX4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15□□□□□ -0.01
CALYQ9NYX4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 SLC25A6P5-201ENST00000435663 894 ntBASIC15□□□□□ -0.01
CALYQ9NYX4 KRT18P57-201ENST00000443599 1254 ntBASIC15□□□□□ -0.01
CALYQ9NYX4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15□□□□□ -0.01
CALYQ9NYX4 TK2-213ENST00000563369 882 ntTSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 MNT-208ENST00000575394 606 ntTSL 4 BASIC15□□□□□ -0.01
CALYQ9NYX4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CALYQ9NYX4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15□□□□□ -0.01
CALYQ9NYX4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15□□□□□ -0.01
CALYQ9NYX4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15□□□□□ -0.01
CALYQ9NYX4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 AC068880.1-201ENST00000507289 2297 ntBASIC15□□□□□ -0.01
CALYQ9NYX4 AP000997.3-201ENST00000623333 2250 ntBASIC15□□□□□ -0.01
CALYQ9NYX4 AR-207ENST00000612010 3896 ntTSL 5 BASIC15□□□□□ -0.01
CALYQ9NYX4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms