Protein–RNA interactions for Protein: Q9NXE8

CWC25, Pre-mRNA-splicing factor CWC25 homolog, humanhuman

Predicted RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25Q9NXE8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CWC25Q9NXE8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CWC25Q9NXE8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 AC093503.3-201ENST00000624917 2352 ntBASIC22.54■■□□□ 1.2
CWC25Q9NXE8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 AP001269.4-201ENST00000609611 512 ntBASIC22.54■■□□□ 1.2
CWC25Q9NXE8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 AL355877.3-201ENST00000622820 899 ntBASIC22.54■■□□□ 1.2
CWC25Q9NXE8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 HLA-A-201ENST00000376802 1334 ntBASIC22.54■■□□□ 1.2
CWC25Q9NXE8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CWC25Q9NXE8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 FAM197Y8-203ENST00000450145 560 ntBASIC22.53■■□□□ 1.2
CWC25Q9NXE8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CWC25Q9NXE8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 TNXA-203ENST00000507684 2038 ntBASIC22.52■■□□□ 1.2
CWC25Q9NXE8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
CWC25Q9NXE8 RBM17P3-201ENST00000417687 1192 ntBASIC22.52■■□□□ 1.2
CWC25Q9NXE8 AP000347.1-202ENST00000435868 847 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms