Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.1■□□□□ 0.01
LIN7CQ9NUP9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 CCR12P-201ENST00000446203 998 ntBASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 FZD10-202ENST00000539839 3282 ntBASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.09■□□□□ 0.01
LIN7CQ9NUP9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIN7CQ9NUP9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 AL096828.2-201ENST00000567259 1965 ntBASIC15.08■□□□□ 0
LIN7CQ9NUP9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 AC087499.1-201ENST00000418141 1075 ntBASIC15.08■□□□□ 0
LIN7CQ9NUP9 MCCD1P1-208ENST00000445732 328 ntBASIC15.08■□□□□ 0
LIN7CQ9NUP9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 AC128688.1-201ENST00000487626 519 ntBASIC15.08■□□□□ 0
LIN7CQ9NUP9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIN7CQ9NUP9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LIN7CQ9NUP9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 AC034236.2-201ENST00000606662 1610 ntBASIC15.07■□□□□ 0
LIN7CQ9NUP9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.07■□□□□ 0
LIN7CQ9NUP9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LIN7CQ9NUP9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms