Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CISHQ9NSE2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CISHQ9NSE2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 PCED1CP-201ENST00000419887 785 ntBASIC19.31■□□□□ 0.68
CISHQ9NSE2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.31■□□□□ 0.68
CISHQ9NSE2 AC116407.4-201ENST00000623319 1061 ntBASIC19.31■□□□□ 0.68
CISHQ9NSE2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CISHQ9NSE2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.31■□□□□ 0.68
CISHQ9NSE2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 TSPY22P-201ENST00000427496 604 ntBASIC19.3■□□□□ 0.68
CISHQ9NSE2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 DUTP2-201ENST00000519164 463 ntBASIC19.3■□□□□ 0.68
CISHQ9NSE2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.3■□□□□ 0.68
CISHQ9NSE2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CISHQ9NSE2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CISHQ9NSE2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CISHQ9NSE2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CISHQ9NSE2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CISHQ9NSE2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CISHQ9NSE2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.29■□□□□ 0.68
CISHQ9NSE2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CISHQ9NSE2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms