Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 AC108860.2-201ENST00000562760 2183 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HINT3Q9NQE9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 CRYGFP-201ENST00000418459 633 ntBASIC16.39■□□□□ 0.21
HINT3Q9NQE9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 KRT18P55-202ENST00000578578 1546 ntBASIC16.39■□□□□ 0.21
HINT3Q9NQE9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
HINT3Q9NQE9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AC211429.1-201ENST00000415277 523 ntBASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AL390955.1-201ENST00000428694 934 ntBASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AP005242.2-201ENST00000580065 1175 ntBASIC16.38■□□□□ 0.21
HINT3Q9NQE9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 AC133561.5-201ENST00000635547 218 ntBASIC16.38■□□□□ 0.21
HINT3Q9NQE9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.38■□□□□ 0.21
HINT3Q9NQE9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 AC080080.1-201ENST00000625121 2420 ntBASIC16.37■□□□□ 0.21
HINT3Q9NQE9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.37■□□□□ 0.21
HINT3Q9NQE9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms