Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 TERF1P1-201ENST00000311003 1181 ntBASIC16.7■□□□□ 0.26
TRIM2Q9C040 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.7■□□□□ 0.26
TRIM2Q9C040 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 AL137013.1-201ENST00000432946 1228 ntBASIC16.7■□□□□ 0.26
TRIM2Q9C040 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 AC099343.3-201ENST00000605834 2503 ntBASIC16.7■□□□□ 0.26
TRIM2Q9C040 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 AC009947.2-201ENST00000444014 672 ntBASIC16.69■□□□□ 0.26
TRIM2Q9C040 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 NEK4P2-201ENST00000580004 1012 ntBASIC16.69■□□□□ 0.26
TRIM2Q9C040 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 AC073508.3-201ENST00000619697 1419 ntBASIC16.69■□□□□ 0.26
TRIM2Q9C040 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM2Q9C040 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM2Q9C040 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 AC093010.1-201ENST00000473625 1624 ntBASIC16.68■□□□□ 0.26
TRIM2Q9C040 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 KRT18P57-201ENST00000443599 1254 ntBASIC16.68■□□□□ 0.26
TRIM2Q9C040 ECEL1P2-202ENST00000465689 757 ntBASIC16.68■□□□□ 0.26
TRIM2Q9C040 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 FAM87A-204ENST00000613235 858 ntBASIC16.68■□□□□ 0.26
TRIM2Q9C040 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM2Q9C040 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM2Q9C040 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms