Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 Y_RNA.390-201ENST00000383932 102 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL36AP29-201ENST00000415878 321 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 YWHAZP5-201ENST00000419975 730 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL5P2-201ENST00000429598 854 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 RPS27AP8-201ENST00000452665 445 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AL590648.1-201ENST00000456479 460 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AK4P6-201ENST00000505168 528 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AL512310.9-201ENST00000553311 948 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 GFER-205ENST00000569451 517 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC005498.1-201ENST00000592125 465 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AL590229.1-201ENST00000603497 542 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC007029.1-201ENST00000604183 313 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 DDX18P5-201ENST00000534547 1306 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM161BP1-201ENST00000457388 1457 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 MTND5P24-201ENST00000438892 1767 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 USP40-202ENST00000409945 1946 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AL117328.2-201ENST00000624617 1940 ntBASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AL034548.1-201ENST00000608495 1672 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CLDN5-201ENST00000403084 2357 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PID1-201ENST00000354069 839 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 MIR513B-201ENST00000385136 84 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RAET1K-201ENST00000403651 784 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC023141.6-201ENST00000429418 337 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 MTND1P2-201ENST00000430604 821 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC024082.1-201ENST00000435250 699 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 NDUFA5P4-201ENST00000436704 385 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 ST13P2-201ENST00000438916 1109 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC122718.1-201ENST00000439448 744 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 FCF1P7-201ENST00000451185 558 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL5P1-201ENST00000460716 894 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 FAM133DP-201ENST00000464802 691 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL31P58-201ENST00000469001 379 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 HNRNPA1P17-201ENST00000496620 924 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC114812.3-201ENST00000509542 730 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms