Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACSIN1Q9BY11 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 PCDHA12-202ENST00000613593 2588 ntBASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 MIR718-201ENST00000390190 70 ntBASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 C2orf69P3-201ENST00000565542 1120 ntBASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 AL355312.1-201ENST00000407115 2176 ntBASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACSIN1Q9BY11 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.27■□□□□ 0.67
PACSIN1Q9BY11 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 MIR3180-4-201ENST00000582223 153 ntBASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC024243.1-201ENST00000609234 778 ntBASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC010653.2-201ENST00000623505 997 ntBASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACSIN1Q9BY11 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 AC138932.1-201ENST00000534164 6830 ntBASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACSIN1Q9BY11 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms