Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 SART3-203ENST00000546611 1184 ntBASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AC021087.4-201ENST00000563761 564 ntBASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 MIR7706-201ENST00000613747 67 ntBASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AC023511.2-201ENST00000618803 211 ntBASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC46A2Q9BY10 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 PHGDH-209ENST00000641074 1780 ntBASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 AC097374.2-201ENST00000618617 1306 ntBASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 AC139887.3-201ENST00000568585 713 ntBASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC46A2Q9BY10 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AC007967.3-201ENST00000434308 558 ntBASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC46A2Q9BY10 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 AC073592.3-201ENST00000625118 1834 ntBASIC18.59■□□□□ 0.57
SLC46A2Q9BY10 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms