Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 Z83836.1-201ENST00000624605 1642 ntBASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AL390719.2-201ENST00000606993 987 ntBASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
CCM2Q9BSQ5 LINC00167-201ENST00000530583 1419 ntBASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AL353692.3-201ENST00000407031 1396 ntBASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 REXO1L9P-201ENST00000604264 2108 ntBASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCM2Q9BSQ5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 AL354751.1-201ENST00000412768 1863 ntBASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 TSPY22P-201ENST00000427496 604 ntBASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 KRT8P26-201ENST00000534154 1276 ntBASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms