Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CPNE1Q99829 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE1Q99829 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE1Q99829 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE1Q99829 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE1Q99829 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE1Q99829 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE1Q99829 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CPNE1Q99829 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE1Q99829 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE1Q99829 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPNE1Q99829 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CPNE1Q99829 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.12■□□□□ 0.49
CPNE1Q99829 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.12■□□□□ 0.49
CPNE1Q99829 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CPNE1Q99829 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPNE1Q99829 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CPNE1Q99829 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE1Q99829 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE1Q99829 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.12■□□□□ 0.49
CPNE1Q99829 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE1Q99829 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE1Q99829 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE1Q99829 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE1Q99829 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE1Q99829 EGLN1P1-201ENST00000531623 762 ntBASIC18.11■□□□□ 0.49
CPNE1Q99829 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE1Q99829 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE1Q99829 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE1Q99829 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPNE1Q99829 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE1Q99829 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CPNE1Q99829 SIRPAP1-201ENST00000448467 1770 ntBASIC18.11■□□□□ 0.49
CPNE1Q99829 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CPNE1Q99829 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE1Q99829 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CPNE1Q99829 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE1Q99829 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE1Q99829 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE1Q99829 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CPNE1Q99829 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CPNE1Q99829 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE1Q99829 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CPNE1Q99829 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE1Q99829 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE1Q99829 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE1Q99829 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CPNE1Q99829 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CPNE1Q99829 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms