Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.97■■□□□ 1.43
ABCA3Q99758 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.97■■□□□ 1.43
ABCA3Q99758 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.97■■□□□ 1.43
ABCA3Q99758 AL032819.2-201ENST00000624543 2162 ntBASIC23.97■■□□□ 1.43
ABCA3Q99758 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ABCA3Q99758 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.97■■□□□ 1.43
ABCA3Q99758 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
ABCA3Q99758 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.97■■□□□ 1.43
ABCA3Q99758 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ABCA3Q99758 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.96■■□□□ 1.43
ABCA3Q99758 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
ABCA3Q99758 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 MRPL20P1-201ENST00000400819 433 ntBASIC23.96■■□□□ 1.43
ABCA3Q99758 WBP2-203ENST00000433525 928 ntTSL 2 BASIC23.96■■□□□ 1.43
ABCA3Q99758 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.96■■□□□ 1.43
ABCA3Q99758 AC091812.2-201ENST00000619081 385 ntBASIC23.96■■□□□ 1.43
ABCA3Q99758 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.96■■□□□ 1.43
ABCA3Q99758 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ABCA3Q99758 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
ABCA3Q99758 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ABCA3Q99758 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
ABCA3Q99758 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.96■■□□□ 1.43
ABCA3Q99758 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.96■■□□□ 1.43
ABCA3Q99758 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC23.96■■□□□ 1.43
ABCA3Q99758 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
ABCA3Q99758 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
ABCA3Q99758 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ABCA3Q99758 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.95■■□□□ 1.42
ABCA3Q99758 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
ABCA3Q99758 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.95■■□□□ 1.42
ABCA3Q99758 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.94■■□□□ 1.42
ABCA3Q99758 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.94■■□□□ 1.42
ABCA3Q99758 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
ABCA3Q99758 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.94■■□□□ 1.42
ABCA3Q99758 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.94■■□□□ 1.42
ABCA3Q99758 PRR29-209ENST00000582540 967 ntTSL 2 BASIC23.94■■□□□ 1.42
ABCA3Q99758 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.94■■□□□ 1.42
ABCA3Q99758 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.94■■□□□ 1.42
ABCA3Q99758 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.94■■□□□ 1.42
ABCA3Q99758 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ABCA3Q99758 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.93■■□□□ 1.42
ABCA3Q99758 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 FAM58CP-201ENST00000435741 640 ntBASIC23.93■■□□□ 1.42
ABCA3Q99758 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC23.93■■□□□ 1.42
ABCA3Q99758 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.93■■□□□ 1.42
ABCA3Q99758 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.93■■□□□ 1.42
ABCA3Q99758 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 AC068137.2-201ENST00000605408 478 ntBASIC23.93■■□□□ 1.42
ABCA3Q99758 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.93■■□□□ 1.42
ABCA3Q99758 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.93■■□□□ 1.42
ABCA3Q99758 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ABCA3Q99758 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.92■■□□□ 1.42
ABCA3Q99758 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ABCA3Q99758 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ABCA3Q99758 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
ABCA3Q99758 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
ABCA3Q99758 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
ABCA3Q99758 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ABCA3Q99758 AC023141.5-201ENST00000458585 616 ntBASIC23.92■■□□□ 1.42
ABCA3Q99758 AC109322.1-201ENST00000524499 1264 ntBASIC23.92■■□□□ 1.42
ABCA3Q99758 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.92■■□□□ 1.42
ABCA3Q99758 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
ABCA3Q99758 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.92■■□□□ 1.42
ABCA3Q99758 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ABCA3Q99758 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms