Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNX18Q96RF0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX18Q96RF0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AC097488.1-201ENST00000507834 756 ntBASIC16.53■□□□□ 0.24
SNX18Q96RF0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AP005242.2-201ENST00000580065 1175 ntBASIC16.53■□□□□ 0.24
SNX18Q96RF0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.53■□□□□ 0.24
SNX18Q96RF0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 GPAT2P1-201ENST00000444924 1672 ntBASIC16.53■□□□□ 0.24
SNX18Q96RF0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX18Q96RF0 AC080080.1-201ENST00000625121 2420 ntBASIC16.53■□□□□ 0.24
SNX18Q96RF0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX18Q96RF0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX18Q96RF0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX18Q96RF0 AD000864.1-201ENST00000624076 2295 ntBASIC16.52■□□□□ 0.24
SNX18Q96RF0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX18Q96RF0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX18Q96RF0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 MIR1224-201ENST00000408193 85 ntBASIC16.52■□□□□ 0.24
SNX18Q96RF0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.52■□□□□ 0.24
SNX18Q96RF0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 MIR3180-5-201ENST00000583743 153 ntBASIC16.52■□□□□ 0.24
SNX18Q96RF0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX18Q96RF0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX18Q96RF0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX18Q96RF0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.52■□□□□ 0.23
SNX18Q96RF0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 AC093677.2-201ENST00000600169 1863 ntBASIC16.51■□□□□ 0.23
SNX18Q96RF0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX18Q96RF0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX18Q96RF0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms