Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG4P5Q96PW8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 AC022616.7-201ENST00000525383 220 ntBASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CSPG4P5Q96PW8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG4P5Q96PW8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 MIR662-201ENST00000384847 95 ntBASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 KRT18P48-201ENST00000434763 852 ntBASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 KRT18P21-201ENST00000515767 1272 ntBASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 KRT18P55-202ENST00000578578 1546 ntBASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms