Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AL158047.1-201ENST00000445918 881 ntBASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 AP000692.2-201ENST00000608391 879 ntBASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC47A1Q96FL8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC47A1Q96FL8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 MESTP1-201ENST00000404287 994 ntBASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 GCSHP5-201ENST00000443090 522 ntBASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 AC098590.1-201ENST00000468126 897 ntBASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC47A1Q96FL8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms