Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE4Q96A23 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CPNE4Q96A23 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE4Q96A23 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 UPK3BP1-201ENST00000428678 509 ntBASIC16.26■□□□□ 0.19
CPNE4Q96A23 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE4Q96A23 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE4Q96A23 AL353692.3-201ENST00000407031 1396 ntBASIC16.26■□□□□ 0.19
CPNE4Q96A23 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.25■□□□□ 0.19
CPNE4Q96A23 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
CPNE4Q96A23 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE4Q96A23 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE4Q96A23 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CPNE4Q96A23 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.24■□□□□ 0.19
CPNE4Q96A23 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE4Q96A23 AC090616.6-201ENST00000582640 721 ntBASIC16.24■□□□□ 0.19
CPNE4Q96A23 AC004263.2-201ENST00000617183 678 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms