Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDKL2Q92772 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL2Q92772 CCR12P-201ENST00000446203 998 ntBASIC18.32■□□□□ 0.52
CDKL2Q92772 AP003041.3-201ENST00000527151 707 ntBASIC18.32■□□□□ 0.52
CDKL2Q92772 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL2Q92772 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDKL2Q92772 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL2Q92772 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL2Q92772 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL2Q92772 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 FZD10-202ENST00000539839 3282 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL2Q92772 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 UNC93B2-201ENST00000285383 730 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDKL2Q92772 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 GCSHP5-201ENST00000443090 522 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKL2Q92772 AC098590.1-201ENST00000468126 897 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 MIR3180-4-201ENST00000582223 153 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 AL023803.3-201ENST00000615559 522 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 CR769767.2-201ENST00000622735 460 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 KRT18P55-202ENST00000578578 1546 ntBASIC18.31■□□□□ 0.52
CDKL2Q92772 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL2Q92772 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL2Q92772 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.3■□□□□ 0.52
CDKL2Q92772 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKL2Q92772 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKL2Q92772 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CDKL2Q92772 AP003071.4-201ENST00000562276 1284 ntBASIC18.3■□□□□ 0.52
CDKL2Q92772 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKL2Q92772 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.3■□□□□ 0.52
CDKL2Q92772 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL2Q92772 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDKL2Q92772 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL2Q92772 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL2Q92772 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL2Q92772 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDKL2Q92772 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL2Q92772 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL2Q92772 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms