Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 GMCL1P1-201ENST00000463439 1581 ntBASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 AC005104.2-201ENST00000427818 678 ntBASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.67■■□□□ 1.38
RAPGEF4Q8WZA2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 AC097374.2-201ENST00000618617 1306 ntBASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 AC132938.6-201ENST00000623828 1655 ntBASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAPGEF4Q8WZA2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAPGEF4Q8WZA2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 AP002414.3-201ENST00000589352 1468 ntBASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.64■■□□□ 1.38
RAPGEF4Q8WZA2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 KRT18P3-201ENST00000451602 1288 ntBASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAPGEF4Q8WZA2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 LAGE3P1-201ENST00000425356 484 ntBASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms