Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 AC093010.1-201ENST00000473625 1624 ntBASIC17.71■□□□□ 0.43
ATL1Q8WXF7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
ATL1Q8WXF7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.71■□□□□ 0.42
ATL1Q8WXF7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATL1Q8WXF7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATL1Q8WXF7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.71■□□□□ 0.42
ATL1Q8WXF7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 STARP1-201ENST00000397973 869 ntBASIC17.7■□□□□ 0.42
ATL1Q8WXF7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 HOMER2P1-201ENST00000455653 964 ntBASIC17.7■□□□□ 0.42
ATL1Q8WXF7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 AP000997.3-201ENST00000623333 2250 ntBASIC17.7■□□□□ 0.42
ATL1Q8WXF7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATL1Q8WXF7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 RNF152P1-201ENST00000397754 604 ntBASIC17.69■□□□□ 0.42
ATL1Q8WXF7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.69■□□□□ 0.42
ATL1Q8WXF7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATL1Q8WXF7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 AL133373.2-201ENST00000623187 2828 ntBASIC17.68■□□□□ 0.42
ATL1Q8WXF7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATL1Q8WXF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms