Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 TERF1P1-201ENST00000311003 1181 ntBASIC16.98■□□□□ 0.31
NUP43Q8NFH3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AC211429.1-201ENST00000415277 523 ntBASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 AC008687.5-201ENST00000593746 558 ntBASIC16.98■□□□□ 0.31
NUP43Q8NFH3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.98■□□□□ 0.31
NUP43Q8NFH3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 OR6D1P-202ENST00000641007 5290 ntBASIC16.97■□□□□ 0.31
NUP43Q8NFH3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 AC005332.8-201ENST00000622750 2735 ntBASIC16.97■□□□□ 0.31
NUP43Q8NFH3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 AC005521.1-201ENST00000393351 872 ntBASIC16.97■□□□□ 0.31
NUP43Q8NFH3 BX664615.1-201ENST00000443558 458 ntBASIC16.97■□□□□ 0.31
NUP43Q8NFH3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 AL441883.1-201ENST00000566170 1045 ntBASIC16.97■□□□□ 0.31
NUP43Q8NFH3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUP43Q8NFH3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 RASA4DP-201ENST00000460726 1199 ntBASIC16.96■□□□□ 0.31
NUP43Q8NFH3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 AC139887.4-201ENST00000607877 719 ntBASIC16.96■□□□□ 0.31
NUP43Q8NFH3 AC011558.1-201ENST00000623459 338 ntBASIC16.96■□□□□ 0.31
NUP43Q8NFH3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NUP43Q8NFH3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 AC067852.2-201ENST00000590513 2313 ntBASIC16.96■□□□□ 0.3
NUP43Q8NFH3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NUP43Q8NFH3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms