Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AL590326.2-201ENST00000625139 305 ntBASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 RASA4DP-201ENST00000460726 1199 ntBASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 KRT18P35-201ENST00000510488 1269 ntBASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 ABALON-201ENST00000629058 1903 ntBASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SIMC1Q8NDZ2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.08■□□□□ 0.33
SIMC1Q8NDZ2 GMCL1P1-201ENST00000463439 1581 ntBASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 TSPY5P-201ENST00000426936 936 ntBASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 AL359075.1-203ENST00000462729 1002 ntBASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 AC092597.1-201ENST00000487352 616 ntBASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIMC1Q8NDZ2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 AC090340.1-201ENST00000620778 4980 ntBASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 RNF152P1-201ENST00000397754 604 ntBASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.07■□□□□ 0.32
SIMC1Q8NDZ2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms