Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSMEM1Q8N8F7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 GNAS-203ENST00000306120 1878 ntBASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
LSMEM1Q8N8F7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 AL138966.2-201ENST00000621997 464 ntBASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LSMEM1Q8N8F7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 AC087499.1-201ENST00000418141 1075 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 PVRIG2P-201ENST00000435460 978 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 DUTP2-201ENST00000519164 463 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms